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Sequences for Solexa Library Preparations:
Genomic DNA oligonucleotide sequences
Adapters 1
5' P-GATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG
5' ACACTCTTTCCCTACACGACGCTCTTCCGATCT
PCR Primers 1
5' AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCT TCCGATCT
5' CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT
Genomic DNA Sequencing Primer
5' ACACTCTTTCCCTACACGACGCTCTTCCGATCT
DpnII gene expression oligonucleotide sequences
Gex Adapter 1
5' P-GATCGTCGGACTGTAGAACTCTGAAC
5'ACAGGTTCAGAGTTCTACAGTCCGAC
Gex Adapter 2
5' CAAGCAGAAGACGGCATACGANN
5' P-TCGTATGCCGTCTTCTGCTTG
Gex PCR Primer 1
5' CAAGCAGAAGACGGCATACGA
Gex PCR Primer 2
5' AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
Gex Sequencing Primer
5' CGACAGGTTCAGAGTTCTACAGTCCGACGATC
NlaIII gene expression oligonucleotide sequences
Gex Adapter 1
5' P-TCGGACTGTAGAACTCTGAAC
5' ACAGGTTCAGAGTTCTACAGTCCGACATG
Gex Adapter 2
5' CAAGCAGAAGACGGCATACGANN
5' P-TCGTATGCCGTCTTCTGCTTG
Gex PCR Primer 1
5' CAAGCAGAAGACGGCATACGA
Gex PCR Primer 2
5' AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
Gex Sequencing Primer
5' CCGACAGGTTCAGAGTTCTACAGTCCGACATG
Small RNA oligonucleotide sequences
RT Primer
5' CAAGCAGAAGACGGCATACGA
5' RNA Adapter
5' GUUCAGAGUUCUACAGUCCGACGAUC
3' RNA Adapter
5' P-UCGUAUGCCGUCUUCUGCUUGUidT
Small RNA PCR Primer 1
5' CAAGCAGAAGACGGCATACGA
Small RNA PCR Primer 2
5' AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
Small RNA Sequencing Primer
5' CGACAGGTTCAGAGTTCTACAGTCCGACGATC
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